Nucleic Acids: Sequence Searching and Alignment
Owner: PAMELA SHAW
Description: Resources and databases for nucleotide sequence and alignment
Suggest a resource for this librarian maintained list.Viewing: all 5 items tagged oligosx
- 1. Blast 2 Sequences
- This tool produces the alignment of two given sequences using BLAST engine for local alignment.
- 2. BLAST: Basic Local Alignment Search Tool
- NCBI. The "BLAST page" offers a number of different BLAST sequence alignment tools for DNA, RNA or proteins. Use "blastn" for nucleotide BLAST
- 3. GenBank
- GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences
- 4. NCBI Entrez Nucleotide
- NCBI. Search for nucleotide sequences from GenBank, RefSeq and PDB. Retrieves curated and archival (non-curated) sequences from a number of sources. Also allows users to submit nucleotide records.
- 5. The EMBL Nucleotide Sequence Database
- EBI. Europe's main sequence database. Search for nucleotide sequences or submit them.
Last Updated: 08/18/2008